BrainSurgery: Declarative YAML-based tool for reproducible neural network checkpoint manipulation
BrainSurgery is a new tooling system for performing reproducible weight manipulations on neural network checkpoints via declarative YAML plans, replacing fragile ad-hoc Python scripts. It supports layer restructuring, precision casting, low-rank factorization, and LoRA extraction, with built-in assertions to catch silent errors. The paper includes case studies on model upcycling and LoRA extraction, targeting researchers who need reliable checkpoint surgery workflows at scale.
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GitOfThoughts: Git-based agent memory substrate with sobering findings on memory utility for novel problems
Researchers introduce GitOfThoughts, a system that stores LLM reasoning trees as git repositories, enabling replayable, auditable, and mergeable agent memory at low engineering cost. Across five memory substrates (none, markdown, vector, graph, git), two benchmarks, and two model scales with pre-registered replications, the paper finds that no memory format reliably improves accuracy on novel problems. Memory only helps above a 'copyability threshold' (similarity >~0.8), where retrieved cases are near-duplicates of the current problem — and even then, the gain is answer retrieval rather than method transfer. The paper also documents a retracted result and refuted hypothesis, modeling a rigorous evaluation standard.
Program synthesis used to reverse-engineer transformer attention heads with executable Python surrogates
Researchers propose a pipeline that approximates transformer attention heads with executable Python programs generated by a language model, then re-ranked by held-out predictive accuracy. Applied to GPT-2, TinyLlama-1.1B, and Llama-3B, fewer than 1,000 programs reproduce attention patterns with >75% average IoU similarity on TinyStories. Replacing 25% of attention heads with programmatic surrogates incurs only a 16% average perplexity increase while preserving downstream QA performance, demonstrating a path toward symbolic transparency in neural models.
Beyond Prediction Accuracy: Target-Space Recovery Profiles for Evaluating Model-Brain Alignment
This paper introduces a framework for evaluating alignment between artificial vision models and the human visual cortex that goes beyond scalar prediction accuracy. Using repeated fMRI data from the Natural Scenes Dataset, the authors decompose brain response spaces into reproducible dimensions and measure which of these dimensions are recovered by model predictions. A key finding is that pretrained and randomly initialized models can achieve similar prediction accuracy while showing distinct recovery profiles, revealing that accuracy alone can mask fundamental model-brain mismatches. The framework also enables brain-to-brain comparisons as a diagnostic human reference baseline.
HABC: Hierarchical Advantage Weighting for Online RL Fine-Tuning of Vision-Language-Action Policies
Researchers introduce Hierarchical Advantage-Weighted Behavior Cloning (HABC), a method for fine-tuning pretrained Vision-Language-Action (VLA) policies via online RL using only sparse binary episode outcomes. HABC trains separate critic heads for viability and efficiency objectives, combines them via a state-adaptive gate, and applies intervention-aware credit assignment to avoid incorrect supervision across human-intervention boundaries. On three contact-rich bimanual real-robot tasks, HABC improves success rates from SFT baselines of 36%, 44%, and 12% to 92%, 88%, and 38% respectively. The work addresses a fundamental credit assignment problem in robot learning from sparse outcome signals.
ReproRepo: Scalable LLM agent framework for reproducibility auditing using GitHub issues
ReproRepo is a new framework for evaluating LLM agents on reproducibility auditing of ML research, using naturally occurring GitHub issues as supervision signals rather than costly manual curation. The framework is instantiated on 1,149 recent ML papers from major conferences and benchmarks four frontier model-agent configurations. The best-performing agent (Codex with GPT-5.5) surfaces at least one semantically related human-reported reproduction blocker for ~90% of papers, though exact localization of issues remains a weakness. The work provides a reusable, scalable evaluation harness for this underexplored agentic task.
DeltaBox: Millisecond-Level Sandbox Checkpoint/Rollback for Stateful AI Agents
DeltaBox introduces a new OS-level abstraction called DeltaState that enables change-based (delta) checkpoint and rollback for AI agent sandboxes, rather than duplicating full state on each operation. Two co-designed OS mechanisms—DeltaFS for filesystem state and DeltaCR for process state—reduce checkpoint latency to ~14ms and rollback to ~5ms, orders of magnitude faster than existing approaches. Evaluations on SWE-bench and RL micro-benchmarks demonstrate that agents can explore substantially more nodes under fixed time budgets, directly enabling deeper test-time tree search and large-scale RL fan-outs.
Signal Collapse and Reward Hacking in Checker-Guided RAG for Biomedical QA
This paper investigates why NLI-based claim checkers used as process rewards in RL-trained medical RAG agents succeed or fail during training. The authors find that a checker's output distribution during training—not its held-out accuracy—determines whether it provides useful gradient signal, with LLM log-probability scoring causing near-total signal collapse (97%+ neutral labels) while a calibrated MedNLI classifier avoids this. A key finding is that stronger checkers can trigger reward hacking cascades (ultra-short answers, search avoidance, language collapse), while moderate-signal local classifiers yield better final model quality (+12% BERTScore over zero-shot). The work frames these as boundary conditions for verifier-as-reward systems in RLVR pipelines.
Automated Benchmark Auditing for AI Agents and Large Language Models (ABA)
The paper introduces Auto Benchmark Audit (ABA), an agentic framework that systematically audits AI benchmark tasks for issues such as ambiguous specifications, environment conflicts, and incorrect ground truths. Applied to 168 benchmarks across nine domains including NeurIPS publications, ABA identifies critical issues in over 25.7% of evaluated tasks. The authors demonstrate that filtering out flawed tasks materially shifts model rankings and improves average performance on SWE-bench Verified and Terminal-Bench 2 by 9.9% and 9.6% respectively, indicating that current benchmark scores are significantly distorted by task quality problems. The agentic tool and annotations are released publicly.

